Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852976.1_cds_XP_016512051.1_24730
CDS Infomation

[gene=LOC107829125] [db_xref=GeneID:107829125] [protein=patatin-like phospholipase domain-containing protein 2 isoform X1] [protein_id=XP_016512051.1] [location=join(4604..5272,7258..7401,8084..8156,8262..8367,8461..8557,9558..9653,9744..9899)] [gbkey=CDS]
Sequence

ATGTCATGTCGTACATATAATTTGTTCCAAGAAGCAGTATACAAGAACAATGTATACGTT
TGGACGAAACATATGAAACGTTTTACCTACCAAACATCTTCTTCCAATTCTTCATCTTCC
TCACAACGTAATCACAAATCAATGTCTTCCCTTTTCCTCTCAAACCCTCGTCCTTTTCGC
CCTCCTCTAAACCCTAAATCCAATCCCCATGTCGTTTTCCCACTTCGTACCCTCAATTTC
TCCGCCAATTCTACCCCACCCCCTCCTCCTCCTCCGAACCCCAATACAAAACCACCCACC
ATCAAAGAACCTCCCTTTCCCCCTCCTCCGCTGGAGGCGGCATCGGAGGAGAAGAAGTCA
TTCGCGGTGGCGACCGGCGAGCTTTTCCTTGGCATTGCATCACGAGTTTTGAGGCGTGGG
AATAGTATAGTTAATGGTGCAGAAGAGAGTGAATCGTACTTTTGGGAACGGAGAAAGGAA
GGGATAGCGACGGTGGTTGAGGACCCGGTTCAGCCGGAGGTTGTGTGGGAGCAGAGGGAA
AAAGATGTGGAAGCTGAGAAGAGCATGAAAACGGTGACTAGCCCTGGGTTTAGCTTCTCT
GCTGCTGGGCTTTTGTTTCCTTATCATCTTGGGGTTGCTAAGCTTCTCATTGAGAAGGGC
TATATCAAGGAGACAACGCCACTGGCTGGTTCTTCTGCTGGTGCAATTGTATGTGCAGTG
GTTGCTTCTGGTGCGAGTATGCAAGAGGCTCTAGATGCTACCAAAATATTAGCTCAAGAT
TGTCGGCTCAGCGGGACAGCATTTCGCCTTGGTGCTGTTCTTAGAGAAATTCTTGAGAAA
TTTCTTCCAGATGATGCTCATATTAGGTGCAATGGAAGAGTTCGTGTTGCTGTAACACAG
ATACTTTGGAGGCCCAGAGGCTTATTGGTTGATCAGTTTGATTCTAAGGAGGATCTTATC
AATGCTGTCTTTACTTCTTCTTTTATCCCAGGATATCTTGCTCCAAGGCCAGCCACACTT
TTCAGGAATAAACTTTGTATTGATGGGGGACTAACACTGTTTATGCCACCTACATCTGCT
GCTCAGACGGTGCGCGTTTGTGCTTTTCCAGCCAGCCGGTTGGGATTGCAAGGAATTGGG
ATAAGTCCTGACTGCAACCCTGAAAATAGGGCGACTCCCCGCCAGCTTTTCAGTTGGGCG
CTTGAGCCAGCAGAAGATGATATTCTTGATAGGCTATTTGAACAAGGTTACACGGATGCA
GCTATGTGGGCTCAGGAGAATCCGGTCGGGGAGTTAGTTCGAGATGATAGTTCTTCGATA
GGCAGCAGTCTAGCACAATAA

Peptide Sequence

PEP ID

XP_016512051.1
PEP Infomation

PREDICTED: patatin-like phospholipase domain-containing protein 2 isoform X1 [Nicotiana tabacum]
Sequence

MSCRTYNLFQEAVYKNNVYVWTKHMKRFTYQTSSSNSSSSSQRNHKSMSSLFLSNPRPFR
PPLNPKSNPHVVFPLRTLNFSANSTPPPPPPPNPNTKPPTIKEPPFPPPPLEAASEEKKS
FAVATGELFLGIASRVLRRGNSIVNGAEESESYFWERRKEGIATVVEDPVQPEVVWEQRE
KDVEAEKSMKTVTSPGFSFSAAGLLFPYHLGVAKLLIEKGYIKETTPLAGSSAGAIVCAV
VASGASMQEALDATKILAQDCRLSGTAFRLGAVLREILEKFLPDDAHIRCNGRVRVAVTQ
ILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNKLCIDGGLTLFMPPTSA
AQTVRVCAFPASRLGLQGIGISPDCNPENRATPRQLFSWALEPAEDDILDRLFEQGYTDA
AMWAQENPVGELVRDDSSSIGSSLAQ

Transcript Sequence

Gene sequence data has not been registered.